原文描述:
Dot plot visualization of each cell type in lung single-cell data. The size of the dot encodes the percentage of cells within a cell type, and the color encodes the average expression level
这个散点图来源于一篇cell文章-Mapping the Mouse Cell Atlas by Microwell-Seq。作者分析成年鼠肺组织单细胞数据聚类得到了32个细胞簇(Y轴)。这个散点图的每一列是一个基因,每一行是一个细胞簇,不同颜色表示基因在对应细胞簇的平均表达量。而且相比于热图来讲,这个散点图中点的大小表示对应细胞簇中表达有对应基因的细胞所占的比例,这为结果解读提供了另一维度的信息。
肿瘤大小散点图
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原文描述:
Tumour volume for individual animals(dots) on the day of euthanasia in the conditions indicated. Data are mean±s.d.
原文描述:
Scatterplot of log2FC of genes from Reactome G1 pathway in each Library 1 screen. Each pairwise comparison is indicated by color. Pearson’s productmoment correlation coefficient is indicated (r).
原文描述:
Log2 fold relative RNA probe distribution showing differential gene expression from bone marrow-derived macrophages (BMDMs) treated in vitro with mock or Aza+ ITF-2357. Angiogenic pathwayassociated genes are highlighted (microarray, BMDM data representative of n = 3 mice)
图片描述:
Two panels show mutation load for each sample in the dataset for SNVs。
Each dot of the sorted scatterplots shows the total number of mutations pre- and post-filtering per sample. Total mutation counts are separated by total number SNVs per samples. Lighter colors indicate pre-filtered mutations from the controlled-access MAF, and deeper colors indicate post-filtered (PASS only) mutations from the open-access MAF. Cancers are ordered by the median number of post-filtered SNVs per tissue. Furthermore, samples are sorted by increasing number of total mutation count for SNV plot.Samples removed during post-filtering are also shown, i.e., LAML and OV in lighter colors without an accompanying pair and are sorted accordingly. The total number of samples for each cancer type is displayed under each cancer label. Finally, the y axis limits were placed from 0 to 50,000 for clarity. This resulted in the removal of 14 hypermutator samples from SNV plot.