使用R,我可以使用以下代码和for循环手动计算和绘制AUC:
test = data.frame(cbind(dt$DV, predicted_prob))
colnames(test)[1] = 'DV'
colnames(test)[2] = 'DV_pred_prob'
TP = rep(NA,101)
FN = rep(NA,101)
FP = rep(NA,101)
TN = rep(NA,101)
Sensitivity = rep(NA,101)
Specificity = rep(NA,101)
AUROC = 0
for(i in 0:100){
test$temp = 0
test[test$DV_pred_prob > (i/100),"temp"] = 1
TP[i+1] = nrow(test[test$DV==1 & test$temp==1,])
FN[i+1] = nrow(test[test$DV==1 & test$temp==0,])
FP[i+1] = nrow(test[test$DV==0 & test$temp==1,])
TN[i+1] = nrow(test[test$DV==0 & test$temp==0,])
Sensitivity[i+1] = TP[i+1] / (TP[i+1] + FN[i+1] )
Specificity[i+1] = TN[i+1] / (TN[i+1] + FP[i+1] )
if(i>0){
AUROC = AUROC+0.5*(Specificity[i+1] - Specificity[i])*(Sensitivity[i+1] +
Sensitivity[i])
}
}
data = data.frame(cbind(Sensitivity,Specificity,id=(0:100)/100))
我正在尝试用Python语言编写相同的代码,但是遇到了错误"TypeError:'Series‘对象是可变的,因此它们不能被散列“
我对Python非常陌生,我正在尝试用R和Python来掌握两种语言。有人能为我指出解决这个问题的正确方向吗?
predictions = pd.DataFrame(predictions[1])
actual = pd.DataFrame(y_test)
test = pd.concat([actual.reset_index(drop=True), predictions], axis=1)
# Rename column Renew to 'actual' and '1' to 'predictions'
test.rename(columns={"Renew": "actual", 1: "predictions"}, inplace=True)
TP = np.repeat('NA', 101)
FN = np.repeat('NA', 101)
FP = np.repeat('NA', 101)
TN = np.repeat('NA', 101)
Sensitivity = np.repeat('NA', 101)
Specificity = np.repeat('NA', 101)
AUROC = 0
for i in range(100):
test['temp'] = 0
test[test['predictions'] > (i/100), "temp"] = 1
TP[i+1] = [test[test["actual"]==1 and test["temp"]==1,]].shape[0]
FN[i+1] = [test[test["actual"]==1 and test["temp"]==0,]].shape[0]
FP[i+1] = [test[test["actual"]==0 and test["temp"]==1,]].shape[0]
TN[i+1] = [test[test["actual"]==0 and test["temp"]==0,]].shape[0]
Sensitivity[i+1] = TP[i+1] / (TP[i+1] + FN[i+1])
Specificity[i+1] = TN[i+1] / (TN[i+1] + FP[i+1])
if(i > 0):
AUROC = AUROC+0.5*(Specificity[i+1] - Specificity[i])*
(Sensitivity[i+1] + Sensitivity[i])
错误似乎发生在包含(i/100)的代码部分。
https://stackoverflow.com/questions/51449292
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