./PhyML-3.1_linux64 -i output_nospace.phy -d nt -b 0 -m GTR -o tlr
..........................
ooooooooooooooooooooooooooooo CURRENT SETTINGS ooooooooooooooooooooooooooooooooooo
..........................
. Sequence filename: output_nospace.phy
. Data type: dna
. Alphabet size: 4
. Sequence format: interleaved
. Number of data sets: 1
. Nb of bootstrapped data sets: 0
. Model name: GTR
. Proportion of invariable sites: 0.000000
. Number of subst. rate categs: 4
. Gamma distribution parameter: estimated
. 'Middle' of each rate class: mean
. Nucleotide equilibrium frequencies: empirical
. Optimise tree topology: yes
. Tree topology search: NNIs
. Starting tree: BioNJ
. Add random input tree: no
. Optimise branch lengths: yes
. Optimise substitution model parameters: yes
. Run ID: none
. Random seed: 1719216107
. Subtree patterns aliasing: no
. Version: 20120412
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
. 14 patterns found (out of a total of 600 sites).
. 585 sites without polymorphism (97.50%).
. Computing pairwise distances...
. Building BioNJ tree...段错误(吐核)
到最后的时候在BIONJ tree上出错,有大神能解答一下吗求求了
相似问题