RStudio服务器上的非零退出状态包安装错误
RStudio服务器上的非零退出状态包安装错误
提问于 2022-02-18 13:42:18
我一直试图在“inlabru”中运行一个LGCP，这需要花费很长时间，所以我被设置了一个Unix帐户来访问RStudio服务器。问题是，现在我得到了一些软件包的非零退出状态安装错误。特别是“rgdal”和“inlabru”。我尝试过(对于'rgdal')安装依赖项和PROJ/GDAL，但没有成功。错误的结尾是：
configure: error: gdal-config not found or not executable.
ERROR: configuration failed for package ‘rgdal’
* removing ‘/home/staff4/ebryce/R/x86_64-pc-linux-gnu-library/4.1/rgdal’
Warning in install.packages :
installation of package ‘rgdal’ had non-zero exit status
ERROR: dependency ‘systemfonts’ is not available for package ‘svglite’
* removing ‘/home/staff4/ebryce/R/x86_64-pc-linux-gnu-library/4.1/svglite’
Warning in install.packages :
installation of package ‘svglite’ had non-zero exit status
ERROR: dependency ‘terra’ is not available for package ‘raster’
* removing ‘/home/staff4/ebryce/R/x86_64-pc-linux-gnu-library/4.1/raster’
Warning in install.packages :
installation of package ‘raster’ had non-zero exit status
ERROR: dependencies ‘s2’, ‘units’ are not available for package ‘sf’
* removing ‘/home/staff4/ebryce/R/x86_64-pc-linux-gnu-library/4.1/sf’
Warning in install.packages :
installation of package ‘sf’ had non-zero exit status
ERROR: dependency ‘raster’ is not available for package ‘leaflet’
* removing ‘/home/staff4/ebryce/R/x86_64-pc-linux-gnu-library/4.1/leaflet’
Warning in install.packages :
installation of package ‘leaflet’ had non-zero exit status
ERROR: dependencies ‘sf’, ‘svglite’ are not available for package ‘leafpop’
* removing ‘/home/staff4/ebryce/R/x86_64-pc-linux-gnu-library/4.1/leafpop’
Warning in install.packages :
installation of package ‘leafpop’ had non-zero exit status
ERROR: dependencies ‘raster’, ‘terra’ are not available for package ‘satellite’
* removing ‘/home/staff4/ebryce/R/x86_64-pc-linux-gnu-library/4.1/satellite’
Warning in install.packages :
installation of package ‘satellite’ had non-zero exit status
ERROR: dependencies ‘leaflet’, ‘raster’, ‘sf’ are not available for package ‘leafem’
* removing ‘/home/staff4/ebryce/R/x86_64-pc-linux-gnu-library/4.1/leafem’
Warning in install.packages :
installation of package ‘leafem’ had non-zero exit status
ERROR: dependencies ‘leafem’, ‘leaflet’, ‘leafpop’, ‘raster’, ‘satellite’, ‘sf’ are not available for package ‘mapview’
* removing ‘/home/staff4/ebryce/R/x86_64-pc-linux-gnu-library/4.1/mapview’
Warning in install.packages :
installation of package ‘mapview’ had non-zero exit status
The downloaded source packages are in
‘/tmp/Rtmp57pHoc/downloaded_packages’我认为安装失败的是库，因为它是服务器，但我尝试将.libPaths()更改为驱动器上的文件夹，但没有成功。我也试过跑步
install.packages("rgdal", type="source", repos="http://R-Forge.R-project.org", configure.args=c('--with-gdal-config=/opt/local/bin/gdal-config'))并获取
configure: error: gdal-config not found - configure argument error.
ERROR: configuration failed for package ‘rgdal’
* removing ‘/home/staff4/ebryce/R/x86_64-pc-linux-gnu-library/4.1/rgdal’
Warning in install.packages :
installation of package ‘rgdal’ had non-zero exit status
The downloaded source packages are in
‘/tmp/Rtmp57pHoc/downloaded_packages’任何帮助都是非常感谢的！
回答 1
Stack Overflow用户
发布于 2022-02-18 14:30:01
没有安装gdal (和朋友)
sudo add-apt-repository ppa:ubuntugis/ubuntugis-unstable
sudo apt-get update
sudo apt-get install libudunits2-dev libgdal-dev libgeos-dev libproj-dev 页面原文内容由Stack Overflow提供。腾讯云小微IT领域专用引擎提供翻译支持
原文链接：
https://stackoverflow.com/questions/71174464
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