问安装软件包- Gviz、rtracklayer和trackViewer，在R中

EN

if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")

BiocManager::install("trackViewer")

if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")

BiocManager::install("Gviz")

'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details

replacement repositories:
    CRAN: https://cran.rstudio.com/

Bioconductor version 3.15 (BiocManager 1.30.18), R 4.2.1 (2022-06-23)
Warning message:
package(s) not installed when version(s) same as current; use `force = TRUE` to re-install: 'Gviz' 

R version 4.2.1 (2022-06-23)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Monterey 12.0.1

Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib

locale:
[1] en_GB.UTF-8/en_GB.UTF-8/en_GB.UTF-8/C/en_GB.UTF-8/en_GB.UTF-8

attached base packages:
[1] grid      stats4    stats     graphics  grDevices utils     datasets  methods  
[9] base     

other attached packages:
[1] Rcpp_1.0.9           GenomicRanges_1.48.0 GenomeInfoDb_1.32.3  IRanges_2.30.0      
[5] S4Vectors_0.34.0     BiocGenerics_0.42.0  BiocManager_1.30.18 

loaded via a namespace (and not attached):
 [1] MatrixGenerics_1.8.1        Biobase_2.56.0              httr_1.4.3                 
 [4] bit64_4.0.5                 assertthat_0.2.1            BiocFileCache_2.4.0        
 [7] blob_1.2.3                  BSgenome_1.64.0             GenomeInfoDbData_1.2.8     
[10] Rsamtools_2.12.0            yaml_2.3.5                  progress_1.2.2             
[13] pillar_1.8.0                RSQLite_2.2.16              lattice_0.20-45            
[16] glue_1.6.2                  digest_0.6.29               RColorBrewer_1.1-3         
[19] XVector_0.36.0              colorspace_2.0-3            htmltools_0.5.3            
[22] Matrix_1.4-1                XML_3.99-0.10               pkgconfig_2.0.3            
[25] biomaRt_2.52.0              zlibbioc_1.42.0             purrr_0.3.4                
[28] scales_1.2.0                BiocParallel_1.30.3         tibble_3.1.8               
[31] KEGGREST_1.36.3             generics_0.1.3              ellipsis_0.3.2             
[34] cachem_1.0.6                SummarizedExperiment_1.26.1 GenomicFeatures_1.48.3     
[37] cli_3.3.0                   magrittr_2.0.3              crayon_1.5.1               
[40] memoise_2.0.1               fansi_1.0.3                 xml2_1.3.3                 
[43] tools_4.2.1                 prettyunits_1.1.1           hms_1.1.1                  
[46] BiocIO_1.6.0                lifecycle_1.0.1             matrixStats_0.62.0         
[49] stringr_1.4.0               munsell_0.5.0               DelayedArray_0.22.0        
[52] AnnotationDbi_1.58.0        Biostrings_2.64.0           compiler_4.2.1             
[55] rlang_1.0.4                 RCurl_1.98-1.8              rstudioapi_0.13            
[58] rjson_0.2.21                rappdirs_0.3.3              htmlwidgets_1.5.4          
[61] bitops_1.0-7                restfulr_0.0.15             codetools_0.2-18           
[64] DBI_1.1.3                   curl_4.3.2                  R6_2.5.1                   
[67] GenomicAlignments_1.32.1    dplyr_1.0.9                 rtracklayer_1.56.1         
[70] fastmap_1.1.0               bit_4.0.4                   utf8_1.2.2                 
[73] filelock_1.0.2              stringi_1.7.8               parallel_4.2.1             
[76] vctrs_0.4.1                 png_0.1-7                   dbplyr_2.2.1               
[79] tidyselect_1.1.2