2.使用gdc-client工具下载
因使用的是Rstudio-Server Rstudio_3.6.3_CentOS7,gdc-client的安装有点波折,解决方法参考https://my.oschina.net...0.75*ncol(exp))
table(keep_exp)
exp <- exp[keep_exp,]
exp[1:4,1:4]
dim(exp)
4.添加分组信息
根据样本ID的第14-15位,给样本分组...(a,aes(y=logFC_limma,x=logFC_edgeR))+geom_point()
p1=ggplot(data=a, aes(y=logFC_limma, x=logFC_edgeR)...(a,aes(y=log2FC_DESeq2,x=logFC_edgeR))+geom_point()
p2=ggplot(data=a, aes(y=log2FC_DESeq2, x=logFC_edgeR...(a,aes(y=log2FC_DESeq2,x=logFC_limma))+geom_point()
p3=ggplot(data=a, aes(y=log2FC_DESeq2, x=logFC_limma